My manual is for series 3 machines, but that doesn't quite sound right to me. The continuous flow locks the hydraulic flow from the skid steer only which is controlled by the thumbwheel. Thats the way it reads in my book. The electrical functions just decide where the work tool needs to send that fluid. In the case of the snowblower I'm assuming that when hydraulics are being sent to it, its running the actual blower part, you need no further activation for that am I correct?
Then you have chute elevation and rotation. Two double acting functions. From the sounds of it your machine does not have the two electrical controls on the right joystick. Those would be controls "3" and "4". The Thumbwheel is "1" and "2", the Trigger is "7", the left stick buttons are "5", and "6" with the trigger obviously being 2 speed. on C series machines the left joystick trigger becomes the 7th function when you flip the switch to toggle between 2 speed control and 7th function as the right hand joystick controls float unlike the B's which use a detent.
Back to your skid, don't need to add more confusion. Basically if you do not have the two buttons on the right stick you have a couple choices. Buy the stick with them from CAT which i don't suggest as I am sure its very expensive. Try to track down some of those factory buttons on a junk machine or something, or just find some cheap buttons that will fit in there and snake the wires down. You are correct that yes the buttons are nothing more than simple on off switches with one wire coming in and one going out, however the actual stick is a pilot type control. Essentially to add your two buttons you will need to punch two holes in that plate, mount the buttons, run the wires down to the plug, get a pin-out diagram from CAT for your machines stick and get some of the pins for that connector, then insert your wires into the connector and you should be good to go. The way they explained it, the machines come pre-wired for most everything. I would get the wiring diagrams and trace everything to the furthest point you can to see what all you might need to add, then add the buttons. Good luck.